The total energy (TOTEN) alone is completely meaningless. It can be positive or negative, small or large since it is given in comparison to a fictisious system: the sum of the isolated atoms evaluated with PBE (for the PBE potentials or CA for the LDA potententials). That is the reference, because this is how the pseudopotentials are created. But these technical details are maybe not the most relevant for you, so I want to try to provide more practical advise.
You can compare the total energy of two structures. In your case, you may want to relax the ionic positions of the Au surface with a defect. Here is a useful page about surface calculations: Surfaces, thin films, and 2D materials
You can also first do a simpler calculation and compute the volume vs total energy for bulk Au using PBE and MSRPBEl and do an equation of state fit to obtain the equilibrium lattice constant and bulk modulus. For that you should
This should help to gain trust in MSRPBEl if the lattice constant and bulk modulus are resonable compared to experiment.
Does this answer your question?