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SPRING R0: Difference between revisions

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where the sum runs over all (<math>M_8</math>) coordinates  the potential acts upon (<math>\xi_{\mu}(q)</math>), which are defined in the {{FILE|ICONST}}-file by setting the status to 8.
where the sum runs over all (<math>M_8</math>) coordinates  the potential acts upon (<math>\xi_{\mu}(q)</math>), which are defined in the {{FILE|ICONST}}-file by setting the status to 8.
The units of <math>\xi{0\mu}</math> correspond to the units of coordinate the potential acts upon (e.g., <math>{\AA}</math> for coordinates with <code>flag</code> R, <math>rad.</math> for coordinates with <code>flag</code> A, dimensionless for coordinates with <code>flag</code> W, etc...).
The units of <math>\xi_{0\mu}</math> correspond to units of the coordinate the potential acts upon (e.g., <math>{\AA}</math> for coordinates with <code>flag</code> R, <math>rad.</math> for coordinates with <code>flag</code> A, dimensionless for coordinates with <code>flag</code> W, etc...).
The number of items defined via {{TAG|SPRING_R0}} must be equal to <math>M_8</math>, otherwise the calculation terminates with an error message.
The number of items defined via {{TAG|SPRING_R0}} must be equal to <math>M_8</math>, otherwise the calculation terminates with an error message.



Revision as of 08:34, 11 April 2023

SPRING_R0 = [real (array)] 

Description: The parameter SPRING_R0 defines position of minimum (ξ0μ) for the harmonic bias potential of the following form: V~(ξ1,,ξM8)=μ=1M12κμ(ξμ(q)ξ0μ)2 where the sum runs over all (M8) coordinates the potential acts upon (ξμ(q)), which are defined in the ICONST-file by setting the status to 8. The units of ξ0μ correspond to units of the coordinate the potential acts upon (e.g., Å for coordinates with flag R, rad. for coordinates with flag A, dimensionless for coordinates with flag W, etc...). The number of items defined via SPRING_R0 must be equal to M8, otherwise the calculation terminates with an error message.


Related tags and articles

SPRING_K SPRING_V0 ICONST Biased molecular dynamics